Immunarch github
WitrynaIntroduction. immunarch is an R package designed to analyse T-cell receptor (TCR) and B-cell receptor (BCR) repertoires, mainly tailored to medical scientists and … WitrynaT cell receptor (TCR) repertoires are critical for antiviral immunity. Determining the TCR repertoire composition, diversity, and dynamics and how they change during viral infection can inform the molecular specificity of host responses to viruses
Immunarch github
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WitrynaFlexibly restructure and aggregate data using just two functions: melt and 'dcast' (or 'acast'). WitrynaProvides a set of functions for data manipulation with list objects, including mapping, filtering, grouping, sorting, updating, searching, and other useful functions. Most functions are designed to be pipeline friendly so that data processing with lists can be chained.
Witryna28 gru 2024 · Every object must have columns in the immunarch compatible format. immunarch_data_format Competent users may provide advanced data … Witryna5 paź 2024 · Generate your Rd documentation, 'NAMESPACE' file, and collation field using specially formatted comments. Writing documentation in-line with code makes it easier to keep your documentation up-to-date as your requirements change. 'Roxygen2' is inspired by the 'Doxygen' system for C++.
WitrynaCircular layout is an efficient way for the visualization of huge amounts of information. Here this package provides an implementation of circular layout generation in R as well as an enhancement of available software. The flexibility of the package is based on the usage of low-level graphics functions such that self-defined high-level graphics can be … Witryna15 gru 2024 · immunarch--- Fast and Seamless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires in R Why immunarch?. Work with any type of …
Witrynaimmunarch/R/io.R. #' your files, so all you need is simply provide the path to your files. #' See "Details" for more information on supported formats. See "Examples" for. #' …
Witryna17 paź 2024 · Immunarch's geneUsage() function now selects all V or D or J genes depending on .gene argument value, not a specific gene. We plan to improve the … immensely impressed daily themed crosswordWitryna10 lut 2024 · Provides a data.table backend for 'dplyr'. The goal of 'dtplyr' is to allow you to write 'dplyr' code that is automatically translated to the equivalent, but usually much … immensely helpfulWitrynaFasting and re-feeding alters host response to infection. Having demonstrated that Ly-6C hi monocytes released from the BM upon re-feeding are chronologically older and transcriptionally different, as well as larger in numbers, we wondered if the older pool would dominate a site of acute inflammation. list of songs by aerosmithWitryna2 lis 2024 · Generate an attractive and useful website from a source package. 'pkgdown' converts your documentation, vignettes, 'README', and more to 'HTML' making it easy to share information about your package online. immense group of companiesWitrynaA backend for the selecting functions of the 'tidyverse'. It makes it easy to implement select-like functions in your own packages in a way that is consistent with other 'tidyverse' interfaces for selection. immensely impressed crossword clueWitryna29 maj 2024 · Package ‘immunarch’ May 4, 2024 Type Package Title Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires Version 0.6.8 Contact [email protected] Description A comprehensive framework for bioinformatics exploratory analysis of bulk and single-cell T-cell receptor and antibody repertoires. It … immense group of companies pvt ltdWitryna29 maj 2024 · Package ‘immunarch’ May 4, 2024 Type Package Title Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires Version 0.6.8 Contact … immense loop-like structures called